Bio-Image Computing


Solving Large Multicut Problems for Connectomics via Domain Decomposition
Constantin Pape,
Thorsten Beier,
Peter Li,
Viren Jain,
Davi D. Bock,
Anna Kreshuk
[pdf]
[bibtex]
@InProceedings{Pape_2017_ICCV_Workshops,
author = {Pape, Constantin and Beier, Thorsten and Li, Peter and Jain, Viren and Bock, Davi D. and Kreshuk, Anna},
title = {Solving Large Multicut Problems for Connectomics via Domain Decomposition},
booktitle = {The IEEE International Conference on Computer Vision (ICCV)},
month = {Oct},
year = {2017}
}

Particle Tracking Accuracy Measurement Based on Comparison of Linear Oriented Forests
Martin Maska,
Pavel Matula
[pdf]
[bibtex]
@InProceedings{Maska_2017_ICCV_Workshops,
author = {Maska, Martin and Matula, Pavel},
title = {Particle Tracking Accuracy Measurement Based on Comparison of Linear Oriented Forests},
booktitle = {The IEEE International Conference on Computer Vision (ICCV)},
month = {Oct},
year = {2017}
}

Count-ception: Counting by Fully Convolutional Redundant Counting
Joseph Paul Cohen,
Genevieve Boucher,
Craig A. Glastonbury,
Henry Z. Lo,
Yoshua Bengio
[pdf]
[bibtex]
@InProceedings{Cohen_2017_ICCV_Workshops,
author = {Paul Cohen, Joseph and Boucher, Genevieve and Glastonbury, Craig A. and Lo, Henry Z. and Bengio, Yoshua},
title = {Count-ception: Counting by Fully Convolutional Redundant Counting},
booktitle = {The IEEE International Conference on Computer Vision (ICCV)},
month = {Oct},
year = {2017}
}

Dual Structured Convolutional Neural Network With Feature Augmentation for Quantitative Characterization of Tissue Histology
Mira Valkonen,
Kimmo Kartasalo,
Kaisa Liimatainen,
Matti Nykter,
Leena Latonen,
Pekka Ruusuvuori
[pdf]
[bibtex]
@InProceedings{Valkonen_2017_ICCV_Workshops,
author = {Valkonen, Mira and Kartasalo, Kimmo and Liimatainen, Kaisa and Nykter, Matti and Latonen, Leena and Ruusuvuori, Pekka},
title = {Dual Structured Convolutional Neural Network With Feature Augmentation for Quantitative Characterization of Tissue Histology},
booktitle = {The IEEE International Conference on Computer Vision (ICCV)},
month = {Oct},
year = {2017}
}

Spheroid Segmentation Using Multiscale Deep Adversarial Networks
Sajith Kecheril Sadanandan,
Johan Karlsson,
Carolina Wahlby
[pdf]
[bibtex]
@InProceedings{Sadanandan_2017_ICCV_Workshops,
author = {Kecheril Sadanandan, Sajith and Karlsson, Johan and Wahlby, Carolina},
title = {Spheroid Segmentation Using Multiscale Deep Adversarial Networks},
booktitle = {The IEEE International Conference on Computer Vision (ICCV)},
month = {Oct},
year = {2017}
}

Spatially-Variant Kernel for Optical Flow Under Low Signal-To-Noise Ratios: Application to Microscopy
Denis Fortun,
Noemi Debroux,
Charles Kervrann
[pdf]
[bibtex]
@InProceedings{Fortun_2017_ICCV_Workshops,
author = {Fortun, Denis and Debroux, Noemi and Kervrann, Charles},
title = {Spatially-Variant Kernel for Optical Flow Under Low Signal-To-Noise Ratios: Application to Microscopy},
booktitle = {The IEEE International Conference on Computer Vision (ICCV)},
month = {Oct},
year = {2017}
}

Discovery of Rare Phenotypes in Cellular Images Using Weakly Supervised Deep Learning
Heba Sailem,
Mar Arias-Garcia,
Chris Bakal,
Andrew Zisserman,
Jens Rittscher
[pdf]
[bibtex]
@InProceedings{Sailem_2017_ICCV_Workshops,
author = {Sailem, Heba and Arias-Garcia, Mar and Bakal, Chris and Zisserman, Andrew and Rittscher, Jens},
title = {Discovery of Rare Phenotypes in Cellular Images Using Weakly Supervised Deep Learning},
booktitle = {The IEEE International Conference on Computer Vision (ICCV)},
month = {Oct},
year = {2017}
}

Towards a Spatio-Temporal Atlas of 3D Cellular Parameters During Leaf Morphogenesis
Faical Selka,
Thomas Blein,
Jasmine Burguet,
Eric Biot,
Patrick Laufs,
Philippe Andrey
[pdf]
[bibtex]
@InProceedings{Selka_2017_ICCV_Workshops,
author = {Selka, Faical and Blein, Thomas and Burguet, Jasmine and Biot, Eric and Laufs, Patrick and Andrey, Philippe},
title = {Towards a Spatio-Temporal Atlas of 3D Cellular Parameters During Leaf Morphogenesis},
booktitle = {The IEEE International Conference on Computer Vision (ICCV)},
month = {Oct},
year = {2017}
}

Towards Virtual H&E Staining of Hyperspectral Lung Histology Images Using Conditional Generative Adversarial Networks
Neslihan Bayramoglu,
Mika Kaakinen,
Lauri Eklund,
Janne Heikkila
[pdf]
[bibtex]
@InProceedings{Bayramoglu_2017_ICCV_Workshops,
author = {Bayramoglu, Neslihan and Kaakinen, Mika and Eklund, Lauri and Heikkila, Janne},
title = {Towards Virtual H&E Staining of Hyperspectral Lung Histology Images Using Conditional Generative Adversarial Networks},
booktitle = {The IEEE International Conference on Computer Vision (ICCV)},
month = {Oct},
year = {2017}
}

Siamese Networks for Chromosome Classification
Swati Jindal,
Gaurav Gupta,
Mohit Yadav,
Monika Sharma,
Lovekesh Vig
[pdf]
[bibtex]
@InProceedings{Jindal_2017_ICCV_Workshops,
author = {Jindal, Swati and Gupta, Gaurav and Yadav, Mohit and Sharma, Monika and Vig, Lovekesh},
title = {Siamese Networks for Chromosome Classification},
booktitle = {The IEEE International Conference on Computer Vision (ICCV)},
month = {Oct},
year = {2017}
}

Deep Convolutional Neural Networks for Detecting Cellular Changes Due to Malignancy
Hakan Wieslander,
Gustav Forslid,
Ewert Bengtsson,
Carolina Wahlby,
Jan-Michael Hirsch,
Christina Runow Stark,
Sajith Kecheril Sadanandan
[pdf]
[bibtex]
@InProceedings{Wieslander_2017_ICCV_Workshops,
author = {Wieslander, Hakan and Forslid, Gustav and Bengtsson, Ewert and Wahlby, Carolina and Hirsch, Jan-Michael and Runow Stark, Christina and Kecheril Sadanandan, Sajith},
title = {Deep Convolutional Neural Networks for Detecting Cellular Changes Due to Malignancy},
booktitle = {The IEEE International Conference on Computer Vision (ICCV)},
month = {Oct},
year = {2017}
}

Synthesising Wider Field Images From Narrow-Field Retinal Video Acquired Using a Low-Cost Direct Ophthalmoscope (Arclight) Attached to a Smartphone
Keylor Daniel Chaves Viquez,
Ognjen Arandjelovic,
Andrew Blaikie,
In Ae Hwang
[pdf]
[bibtex]
@InProceedings{Viquez_2017_ICCV_Workshops,
author = {Daniel Chaves Viquez, Keylor and Arandjelovic, Ognjen and Blaikie, Andrew and Ae Hwang, In},
title = {Synthesising Wider Field Images From Narrow-Field Retinal Video Acquired Using a Low-Cost Direct Ophthalmoscope (Arclight) Attached to a Smartphone},
booktitle = {The IEEE International Conference on Computer Vision (ICCV)},
month = {Oct},
year = {2017}
}

Virtual Blood Vessels in Complex Background Using Stereo X-Ray Images
Qiuyu Chen,
Ryoma Bise,
Lin Gu,
Yinqiang Zheng,
Imari Sato,
Jenq-Neng Hwang,
Nobuaki Imanishi,
Sadakazu Aiso
[pdf] [arXiv]
[bibtex]
@InProceedings{Chen_2017_ICCV_Workshops,
author = {Chen, Qiuyu and Bise, Ryoma and Gu, Lin and Zheng, Yinqiang and Sato, Imari and Hwang, Jenq-Neng and Imanishi, Nobuaki and Aiso, Sadakazu},
title = {Virtual Blood Vessels in Complex Background Using Stereo X-Ray Images},
booktitle = {The IEEE International Conference on Computer Vision (ICCV)},
month = {Oct},
year = {2017}
}

Part-To-Whole Registration of Histology and MRI Using Shape Elements
Jonas Pichat,
Eugenio Iglesias,
Sotiris Nousias,
Tarek Yousry,
Sebastien Ourselin,
Marc Modat
[pdf]
[bibtex]
@InProceedings{Pichat_2017_ICCV_Workshops,
author = {Pichat, Jonas and Iglesias, Eugenio and Nousias, Sotiris and Yousry, Tarek and Ourselin, Sebastien and Modat, Marc},
title = {Part-To-Whole Registration of Histology and MRI Using Shape Elements},
booktitle = {The IEEE International Conference on Computer Vision (ICCV)},
month = {Oct},
year = {2017}
}

Computer-Automated Malaria Diagnosis and Quantitation Using Convolutional Neural Networks
Courosh Mehanian,
Mayoore Jaiswal,
Charles Delahunt,
Clay Thompson,
Matt Horning,
Liming Hu,
Travis Ostbye,
Shawn McGuire,
Martha Mehanian,
Cary Champlin,
Ben Wilson,
Earl Long,
Stephane Proux,
Dionicia Gamboa,
Peter Chiodini,
Jane Carter,
Mehul Dhorda,
David Isaboke,
Bernhards Ogutu,
Wellington Oyibo,
Elizabeth Villasis,
Kyaw Myo Tun,
Christine Bachman,
David Bell
[pdf]
[bibtex]
@InProceedings{Mehanian_2017_ICCV_Workshops,
author = {Mehanian, Courosh and Jaiswal, Mayoore and Delahunt, Charles and Thompson, Clay and Horning, Matt and Hu, Liming and Ostbye, Travis and McGuire, Shawn and Mehanian, Martha and Champlin, Cary and Wilson, Ben and Long, Earl and Proux, Stephane and Gamboa, Dionicia and Chiodini, Peter and Carter, Jane and Dhorda, Mehul and Isaboke, David and Ogutu, Bernhards and Oyibo, Wellington and Villasis, Elizabeth and Myo Tun, Kyaw and Bachman, Christine and Bell, David},
title = {Computer-Automated Malaria Diagnosis and Quantitation Using Convolutional Neural Networks},
booktitle = {The IEEE International Conference on Computer Vision (ICCV)},
month = {Oct},
year = {2017}
}

Automatic 3D Single Neuron Reconstruction With Exhaustive Tracing
Zihao Tang,
Donghao Zhang,
Siqi Liu,
Yang Song,
Hanchuan Peng,
Weidong Cai
[pdf]
[bibtex]
@InProceedings{Tang_2017_ICCV_Workshops,
author = {Tang, Zihao and Zhang, Donghao and Liu, Siqi and Song, Yang and Peng, Hanchuan and Cai, Weidong},
title = {Automatic 3D Single Neuron Reconstruction With Exhaustive Tracing},
booktitle = {The IEEE International Conference on Computer Vision (ICCV)},
month = {Oct},
year = {2017}
}

Bots for Software-Assisted Analysis of Image-Based Transcriptomics
Marcelo Cicconet,
Daniel R. Hochbaum,
David L. Richmond,
Bernardo L. Sabatini
[pdf]
[bibtex]
@InProceedings{Cicconet_2017_ICCV_Workshops,
author = {Cicconet, Marcelo and Hochbaum, Daniel R. and Richmond, David L. and Sabatini, Bernardo L.},
title = {Bots for Software-Assisted Analysis of Image-Based Transcriptomics},
booktitle = {The IEEE International Conference on Computer Vision (ICCV)},
month = {Oct},
year = {2017}
}